cross combination
Predicting Yield Performance of Parents in Plant Breeding: A Neural Collaborative Filtering Approach
Khaki, Saeed, Khalilzadeh, Zahra, Wang, Lizhi
Experimental corn hybrids are created in plant breeding programs by crossing two parents, so-called inbred and tester, together. Identification of best parent combinations for crossing is challenging since the total number of possible cross combinations of parents is large and it is impractical to test all possible cross combinations due to limited resources of time and budget. In the 2020 Syngenta Crop Challenge, Syngenta released several large datasets that recorded the historical yield performances of around 4% of total cross combinations of 593 inbreds with 496 testers which were planted in 280 locations between 2016 and 2018 and asked participants to predict the yield performance of cross combinations of inbreds and testers that have not been planted based on the historical yield data collected from crossing other inbreds and testers. In this paper, we present a collaborative filtering method which is an ensemble of matrix factorization method and neural networks to solve this problem. Our computational results suggested that the proposed model significantly outperformed other models such as LASSO, random forest (RF), and neural networks. Presented method and results were produced within the 2020 Syngenta Crop Challenge.
A Study of Associative Evidential Reasoning
Cheng, Yizong, Kashyap, Rangasami L.
Evidential reasoning is cast as the problem of simplifying the evidence-hypothesis relation and constructing combination formulas that possess certain testable properties. Important classes of evidence as identifiers, annihilators, and idempotents and their roles in determining binary operations on intervals of reals are discussed. The appropriate way of constructing formulas for combining evidence and their limitations, for instance, in robustness, are presented.